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  • Top cofit genes for PP_1799 from Pseudomonas putida KT2440

    GDP-mannose 4,6-dehydratase
    SEED: GDP-mannose 4,6-dehydratase (EC 4.2.1.47)
    KEGG: GDPmannose 4,6-dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1780 putative mannosyltransferase no 0.99
    2 PP_1805 Polysaccharide biosynthesis protein 1.00 0.98
    3 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase 0.99 0.98
    4 PP_1802 glycosyl transferase 1.00 0.98
    5 PP_1801 Glycosyl transferase WbpY 0.93 0.98
    6 PP_1800 Oxidoreductase Rmd 0.91 0.97
    7 PP_1804 Glycosyl transferase WbpL 0.92 0.95
    8 PP_1803 UDP-sugar epimerase 0.87 0.93
    9 PP_1777 phosphomannomutase 1.00 0.90
    10 PP_4938 putative Glycosyl transferase no 0.85
    11 PP_4936 O-antigen polymerase no 0.82
    12 PP_3627 conserved protein of unknown function no 0.70
    13 PP_1775 Metallo-beta-lactamase family protein 0.31 0.69
    14 PP_1627 conserved protein of unknown function no 0.69
    15 PP_1798 Outer membrane efflux protein no 0.68
    16 PP_1779 Lipopolysaccharide ABC export system, ATP-binding protein 0.91 0.67
    17 PP_0540 conserved inner membrane protein 0.80 0.66
    18 PP_1774 conserved exported protein of unknown function no 0.66
    19 PP_0405 conserved protein of unknown function 0.67 0.65
    20 PP_2148 transcription-repair coupling factor 0.78 0.65

    Or look for negative cofitness