Top cofit genes for PP_1778 from Pseudomonas putida KT2440

Lipopolysaccharide ABC export system, permease protein
SEED: O-antigen export system permease protein RfbD
KEGG: lipopolysaccharide transport system permease protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_1779		Lipopolysaccharide ABC export system, ATP-binding protein	0.99	0.95
2	PP_4936		O-antigen polymerase	0.43	0.68
3	PP_1777		phosphomannomutase	0.83	0.67
4	PP_4938		putative Glycosyl transferase	0.30	0.65
5	PP_1804		Glycosyl transferase WbpL	0.75	0.64
6	PP_1780		putative mannosyltransferase	no	0.63
7	PP_1802		glycosyl transferase	0.70	0.61
8	PP_1801		Glycosyl transferase WbpY	0.99	0.60
9	PP_1799		GDP-mannose 4,6-dehydratase	0.89	0.60
10	PP_1805		Polysaccharide biosynthesis protein	0.97	0.60
11	PP_1776		Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase	0.83	0.60
12	PP_1800		Oxidoreductase Rmd	0.98	0.58
13	PP_4726		Chaperone protein DnaJ	no	0.54
14	PP_1803		UDP-sugar epimerase	0.99	0.53
15	PP_0397		protein kinase	0.52	0.52
16	PP_0395		putative type IV piliation protein	0.64	0.52
17	PP_0396		conserved protein of unknown function	0.53	0.52
18	PP_1198		transcriptional regulator, Cro/CI family (higA antitoxin like)	no	0.48
19	PP_0406		Nucleotidyltransferase family protein	0.67	0.48
20	PP_1355		Muropeptide permease AmpG	0.45	0.47

Or look for negative cofitness