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  • Top cofit genes for PP_1719 from Pseudomonas putida KT2440

    Tail-specific protease prc
    SEED: Periplasmic protease
    KEGG: carboxyl-terminal processing protease

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1598 regulatory intramembrane protein RIP zinc protease 0.86 0.51
    2 PP_2322 Major outer membrane lipoprotein 0.79 0.50
    3 PP_2320 conserved exported protein of unknown function 0.73 0.50
    4 PP_0938 conserved protein of unknown function 0.85 0.50
    5 PP_1202 putative enzyme involved in modification of phospholipids 0.31 0.48
    6 PP_4994 conserved protein of unknown function 0.79 0.47
    7 PP_1206 basic-amino-acid specific porin OprD 0.38 0.47
    8 PP_1898 MotA/TolQ/ExbB proton channel family protein 0.59 0.46
    9 PP_1238 putative Lipoprotein 0.78 0.43
    10 PP_1232 conserved exported protein of unknown function 0.52 0.43
    11 PP_1460 putative Membrane protein 0.65 0.42
    12 PP_1201 conserved exported protein of unknown function 0.33 0.42
    13 PP_4880 exoribonuclease R 0.72 0.41
    14 PP_4804 RlpA-like lipoprotein 0.91 0.39
    15 PP_4785 conserved exported protein of unknown function 0.87 0.38
    16 PP_4342 flagellar synthesis regulator, putative ATPase 0.51 0.37
    17 PP_5310 junction-specific ATP-dependent DNA helicase 0.76 0.37
    18 PP_0958 phospholipid ABC transporter ATP-binding subunit 0.89 0.37
    19 PP_0856 conserved lipoprotein of unknown function 0.92 0.36
    20 PP_2889 putative Transmembrane regulator PrtR no 0.36

    Or look for negative cofitness