Top cofit genes for PP_1713 from Pseudomonas putida KT2440

Transcriptional regulator PcaQ
SEED: Transcriptional regulator, LysR family
KEGG: LysR family transcriptional regulator, pca operon transcriptional activator

Rank Hit Name Description Conserved? Cofitness  
1 PP_4656 protocatechuate 3,4-dioxygenase beta chain 0.96 0.73
2 PP_4655 protocatechuate 3,4-dioxygenase alpha chain 0.93 0.73
3 PP_1379 3-carboxy-cis,cis-muconate cycloisomerase 0.89 0.73
4 PP_1380 3-oxoadipate enol-lactonase 2 0.91 0.69
5 PP_1377 beta-ketoadipyl-CoA thiolase 0.88 0.67
6 PP_3952 3-oxoadipate CoA-transferase subunit A 0.91 0.66
7 PP_3951 3-oxoadipate CoA-transferase subunit A 0.91 0.65
8 PP_1375 transcription regulatory protein (pca regulon) 0.51 0.65
9 PP_1378 alpha-ketoglutarate permease 0.25 0.63
10 PP_3737 vanillate O-demethylase oxidoreductase 0.34 0.52
11 PP_1381 4-carboxymuconolactone decarboxylase 0.92 0.52
12 PP_3736 vanillate O-demethylase oxygenase subunit 0.25 0.52
13 PP_1616 formaldehyde dehydrogenase, glutathione-dependent no 0.43
14 PP_2354 Sensory box histidine kinase/response regulator no 0.40
15 PP_3590 aromatic-amino-acid transaminase (EC 2.6.1.57) (from data) no 0.40
16 PP_1376 4-hydroxybenzoate transporter 0.36 0.40
17 PP_3356 p-coumarate CoA-ligase (EC 6.2.1.12) (from data) 0.42 0.39
18 PP_2356 putative Phytochrome family protein no 0.36
19 PP_3358 hydroxycinnamoyl-CoA hydratase-lyase (EC 4.1.2.61) (from data) no 0.36
20 PP_3537 p-hydroxybenzoate hydroxylase 0.97 0.32

Or look for negative cofitness