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  • Top cofit genes for PP_1697 from Pseudomonas putida KT2440

    transcriptional regulator, GntR family
    SEED: Putative alkanesulfonate metabolism utilization regulator
    KEGG: GntR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2245 Transcriptional regulator, Cro/CI family 0.73 0.22
    2 PP_1552 putative Phage replication protein no 0.21
    3 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase no 0.20
    4 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.19
    5 PP_3884 Phage holin, lambda family no 0.19
    6 PP_2900 conserved protein of unknown function no 0.19
    7 PP_4285 5-hydroxyisourate hydrolase 0.32 0.19
    8 PP_2211 Transcriptional regulator, AraC family no 0.19
    9 PP_0749 conserved exported protein of unknown function no 0.18
    10 PP_4249 conserved protein of unknown function no 0.18
    11 PP_2661 conserved protein of unknown function no 0.17
    12 PP_1072 Leucine-rich repeat domain protein no 0.17
    13 PP_3653 Transporter, LysE family no 0.17
    14 PP_2581 conserved protein of unknown function no 0.17
    15 PP_3654 leucine-responsive regulatory protein no 0.16
    16 PP_2832 galactose-binding protein regulator no 0.16
    17 PP_1553 conserved protein of unknown function no 0.16
    18 PP_1313 Transcriptional regulator, AraC family no 0.15
    19 PP_4171 conserved exported protein of unknown function no 0.15
    20 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.38 0.15

    Or look for negative cofitness