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  • Top cofit genes for PP_1661 from Pseudomonas putida KT2440

    putative Dehydrogenase subunit
    SEED: Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4375 flagellar chaperone, inhibits premature FliC assembly no 0.25
    2 PP_0123 DNA polymerase I, 5 no 0.25
    3 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons no 0.21
    4 PP_0823 Selenide, water dikinase no 0.21
    5 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase no 0.21
    6 PP_4366 flagellum-specific ATP synthase no 0.21
    7 PP_4380 Flagellar hook-associated protein FlgL no 0.21
    8 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon no 0.21
    9 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 no 0.21
    10 PP_3939 porin-like protein no 0.21
    11 PP_1498 putative Lipoprotein no 0.20
    12 PP_4378 flagellin, filament structural protein no 0.20
    13 PP_0951 Ribosome hibernation promoting factor no 0.20
    14 PP_4381 Flagellar hook-associated protein FlgK no 0.20
    15 PP_4343 Flagellar biosynthesis protein FlhF no 0.20
    16 PP_4367 Flagellar assembly protein FliH no 0.20
    17 PP_1364 conserved exported protein of unknown function no 0.20
    18 PP_4376 flagellar filament capping protein no 0.20
    19 PP_4382 Peptidoglycan hydrolase FlgJ no 0.19
    20 PP_4358 flagellar synthesis, switching and energizing component no 0.19

    Or look for negative cofitness