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  • Top cofit genes for PP_1637 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: LysR family transcriptional regulator PA3398

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.76 0.27
    2 PP_0570 lipoprotein of unknown function 0.40 0.27
    3 PP_5639 conserved exported protein of unknown function no 0.26
    4 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.40 0.25
    5 PP_0083 tryptophan synthase beta chain 0.83 0.25
    6 PP_1079 Ornithine carbamoyltransferase 0.76 0.25
    7 PP_4270 conserved exported protein of unknown function no 0.24
    8 PP_4480 arginine N-succinyltransferase, subunit alpha 0.45 0.24
    9 PP_0082 tryptophan synthase alpha chain 0.76 0.24
    10 PP_5227 diaminopimelate decarboxylase 0.80 0.24
    11 PP_4696 Nitrogen regulation protein NR(I) 0.52 0.23
    12 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.87 0.23
    13 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase 0.86 0.22
    14 PP_2370 conserved protein of unknown function 0.88 0.22
    15 PP_1303 Sulfate adenylyltransferase subunit 2 0.86 0.22
    16 PP_1552 putative Phage replication protein 0.33 0.22
    17 PP_1025 2-isopropylmalate synthase 0.85 0.22
    18 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 0.80 0.22
    19 PP_0292 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) 0.81 0.21
    20 PP_2661 conserved protein of unknown function no 0.21

    Or look for negative cofitness