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  • Top cofit genes for PP_1598 from Pseudomonas putida KT2440

    regulatory intramembrane protein RIP zinc protease
    KEGG: regulator of sigma E protease

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1719 Tail-specific protease prc 0.86 0.51
    2 PP_1202 putative enzyme involved in modification of phospholipids 0.70 0.41
    3 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.82 0.39
    4 PP_1201 conserved exported protein of unknown function 0.82 0.38
    5 PP_0938 conserved protein of unknown function 0.24 0.36
    6 PP_2320 conserved exported protein of unknown function 0.84 0.36
    7 PP_2322 Major outer membrane lipoprotein 0.36 0.36
    8 PP_0949 putative ATP-binding protein UPF0042 0.85 0.36
    9 PP_5706 Sec translocation complex - SecG subunit no 0.35
    10 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily 0.32 0.34
    11 PP_4592 putative metal dependent hydrolase 0.54 0.34
    12 PP_1238 putative Lipoprotein no 0.34
    13 PP_1036 membrane-bound lytic murein transglycosylase F 0.76 0.33
    14 PP_4004 DNA translocase FtsK 0.88 0.32
    15 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.83 0.32
    16 PP_4755 Outer membrane ferrichrome-iron receptor no 0.32
    17 PP_1206 basic-amino-acid specific porin OprD no 0.31
    18 PP_4342 flagellar synthesis regulator, putative ATPase 0.47 0.31
    19 PP_5045 tRNA sulfurtransferase 0.24 0.31
    20 PP_5218 DedA family protein 0.70 0.31

    Or look for negative cofitness