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  • Top cofit genes for PP_1555 from Pseudomonas putida KT2440

    putative Phage integrase
    SEED: phage integrase, putative

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1145 RNA polymerase-associated protein RapA no 0.20
    2 PP_5250 proline-specific outer membrane porin D no 0.20
    3 PP_0162 RNA polymerase sigma-70 factor, ECF subfamily no 0.18
    4 PP_3104 conserved protein of unknown function no 0.18
    5 PP_4964 D-erythrose 4-phosphate dehydrogenase no 0.16
    6 PP_1353 conserved membrane protein of unknown function no 0.16
    7 PP_5309 oxidative and nitrosative stress transcriptional dual regulator no 0.16
    8 PP_1128 OmpA family protein no 0.16
    9 PP_0393 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase no 0.16
    10 PP_0830 Acetyltransferase, GNAT family no 0.16
    11 PP_5310 junction-specific ATP-dependent DNA helicase no 0.16
    12 PP_2607 conserved exported protein of unknown function no 0.15
    13 PP_1931 conserved protein of unknown function no 0.15
    14 PP_2336 aconitate hydratase 1 no 0.15
    15 PP_5738 conserved protein of unknown function no 0.15
    16 PP_4693 RNA polymerase-binding transcription factor DksA no 0.15
    17 PP_3440 conserved protein of unknown function no 0.15
    18 PP_1629 Protein RecA no 0.15
    19 PP_2337 aconitate isomerase no 0.15
    20 PP_2083 putative Lipase no 0.14

    Or look for negative cofitness