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  • Top cofit genes for PP_1538 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Phage-related protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1581 BNR domain protein no 0.26
    2 PP_1579 conserved protein of unknown function no 0.25
    3 PP_1582 conserved protein of unknown function no 0.25
    4 PP_1563 putative Phage terminase, large subunit no 0.23
    5 PP_1574 conserved protein of unknown function 0.46 0.19
    6 PP_4971 putative Outer membrane-bound lytic murein transglycolase A no 0.18
    7 PP_1567 Capsid protein 0.48 0.18
    8 PP_1777 phosphomannomutase no 0.17
    9 PP_1565 Phage portal protein, HK97 family 0.48 0.17
    10 PP_1871 Protease HtpX 0.55 0.17
    11 PP_0540 conserved inner membrane protein 0.29 0.17
    12 PP_5507 protein of unknown function no 0.17
    13 PP_1577 Phage tail tape meausure protein, lambda family no 0.17
    14 PP_1969 putative Molybdenum cofactor biosynthesis protein A no 0.17
    15 PP_1572 conserved protein of unknown function 0.50 0.16
    16 PP_1803 UDP-sugar epimerase no 0.16
    17 PP_1789 Hydrolase, haloacid dehalogenase-like family no 0.16
    18 PP_1561 putative Phage holin no 0.16
    19 PP_1566 Peptidase U35 no 0.16
    20 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase 0.21 0.16

    Or look for negative cofitness