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Cofit
Protein
Homologs
Top cofit genes for PP_1533 from
Pseudomonas putida KT2440
putative Excisionase
SEED: excisionase, putative
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1226
pre-queuosine 0 synthase
no
0.18
2
PP
_1319
Ubiquinol--cytochrome c reductase, cytochrome c1
no
0.17
3
PP
_1099
Cold shock protein CapB
no
0.16
4
PP
_0123
DNA polymerase I, 5
no
0.16
5
PP
_2903
peptidyl-prolyl cis-trans isomerase B (rotamase B)
no
0.15
6
PP
_1318
Cytochrome b
no
0.15
7
PP
_0984
conserved membrane protein of unknown function
no
0.15
8
PP
_3676
conserved protein of unknown function
no
0.15
9
PP
_2077
diaminopimelate decarboxylase
no
0.14
10
PP
_0429
Oxidoreductase, short chain dehydrogenase/reductase family
no
0.14
11
PP
_0395
putative type IV piliation protein
no
0.14
12
PP
_1325
putative lipoprotein
no
0.14
13
PP
_0012
DNA replication and repair protein
no
0.14
14
PP
_1321
ClpXP protease specificity-enhancing factor
no
0.14
15
PP
_4250
cytochrome c oxidase subunit I, cbb3-type
no
0.14
16
PP
_4271
conserved protein of unknown function
no
0.14
17
PP
_0397
protein kinase
no
0.14
18
PP
_3649
Transcriptional regulator, GntR family
no
0.14
19
PP
_4803
D-alanyl-D-alanine carboxypeptidase
no
0.14
20
PP
_2460
ribonucleoside hydrolase
no
0.13
Or look for
negative cofitness