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  • Top cofit genes for PP_1532 from Pseudomonas putida KT2440

    putative Phage integrase
    SEED: site-specific recombinase, phage integrase family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.30
    2 PP_3786 aminotransferase no 0.26
    3 PP_3790 diaminopimelate epimerase no 0.26
    4 PP_3787 conserved protein of unknown function no 0.24
    5 PP_3933 conserved membrane protein of unknown function no 0.24
    6 PP_5147 Hydrolase, haloacid dehalogenase-like family no 0.23
    7 PP_3788 putative Non-ribosomal peptide synthetase no 0.23
    8 PP_3443 putative glyceraldehyde-3-phosphate dehydrogenase no 0.23
    9 PP_0718 Sulfate transporter no 0.22
    10 PP_3062 putative Pyocin R2_PP, tail length determination protein no 0.22
    11 PP_1573 putative Major tail protein no 0.22
    12 PP_0506 putative ABC efflux transporter, permease protein no 0.22
    13 PP_1253 Transcriptional regulator, ArsR family no 0.22
    14 PP_4946 sodium/L-proline transporter 0.51 0.21
    15 PP_2561 putative secreted hemolysin-type calcium-binding bacteriocin no 0.21
    16 PP_2714 Sensor histidine kinase no 0.21
    17 PP_1057 Transcriptional regulator, PadR family no 0.21
    18 PP_3302 RND efflux transporter no 0.21
    19 PP_3044 Phage portal protein, lambda family no 0.21
    20 PP_3376 putative phosphonate dehydrogenase no 0.21

    Or look for negative cofitness