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  • Top cofit genes for PP_1517 from Pseudomonas putida KT2440

    RND efflux transporter
    SEED: RND efflux transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4923 Outer membrane efflux protein 0.91 0.24
    2 PP_0691 Glutamate 5-kinase 0.61 0.20
    3 PP_5538 putative ABC transporter, substrate-binding protein no 0.19
    4 PP_5014 Phosphoribosyl-AMP cyclohydrolase 0.51 0.18
    5 PP_4999 dihydroorotase-like protein 0.71 0.18
    6 PP_5128 Dihydroxy-acid dehydratase 0.68 0.18
    7 PP_0417 Anthranilate synthase component 1 0.56 0.18
    8 PP_2001 O-succinylhomoserine sulfhydrylase 0.55 0.17
    9 PP_1616 formaldehyde dehydrogenase, glutathione-dependent 0.19 0.17
    10 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase no 0.17
    11 PP_2394 Leucine-rich repeat domain protein no 0.17
    12 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 0.77 0.17
    13 PP_0029 two component heavy metal response regulator no 0.17
    14 PP_4723 Carbamoyl-phosphate synthase large chain 0.70 0.17
    15 PP_0966 Histidinol dehydrogenase 0.65 0.17
    16 PP_0422 Indole-3-glycerol phosphate synthase 0.57 0.17
    17 PP_0339 Pyruvate dehydrogenase E1 component 0.40 0.16
    18 PP_4840 D-alanine, beta-alanine, D-serine, glycine permease no 0.16
    19 PP_4724 Carbamoyl-phosphate synthase small chain 0.70 0.16
    20 PP_5015 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) 0.49 0.16

    Or look for negative cofitness