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Cofit
Protein
Homologs
Top cofit genes for PP_1517 from
Pseudomonas putida KT2440
RND efflux transporter
SEED: RND efflux transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4923
Outer membrane efflux protein
0.91
0.24
2
PP
_0691
Glutamate 5-kinase
0.61
0.20
3
PP
_5538
putative ABC transporter, substrate-binding protein
no
0.19
4
PP
_5014
Phosphoribosyl-AMP cyclohydrolase
0.51
0.18
5
PP
_4999
dihydroorotase-like protein
0.71
0.18
6
PP
_5128
Dihydroxy-acid dehydratase
0.68
0.18
7
PP
_0417
Anthranilate synthase component 1
0.56
0.18
8
PP
_2001
O-succinylhomoserine sulfhydrylase
0.55
0.17
9
PP
_1616
formaldehyde dehydrogenase, glutathione-dependent
0.19
0.17
10
PP
_4679
acetohydroxybutanoate synthase / acetolactate synthase
no
0.17
11
PP
_2394
Leucine-rich repeat domain protein
no
0.17
12
PP
_4680
acetohydroxybutanoate synthase / acetolactate synthase
0.77
0.17
13
PP
_0029
two component heavy metal response regulator
no
0.17
14
PP
_4723
Carbamoyl-phosphate synthase large chain
0.70
0.17
15
PP
_0966
Histidinol dehydrogenase
0.65
0.17
16
PP
_0422
Indole-3-glycerol phosphate synthase
0.57
0.17
17
PP
_0339
Pyruvate dehydrogenase E1 component
0.40
0.16
18
PP
_4840
D-alanine, beta-alanine, D-serine, glycine permease
no
0.16
19
PP
_4724
Carbamoyl-phosphate synthase small chain
0.70
0.16
20
PP
_5015
phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)
(from data)
0.49
0.16
Or look for
negative cofitness