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  • Top cofit genes for PP_1512 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Periplasmic protein TonB, links inner and outer membranes

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4336 flagellar motor rotation protein 0.22 0.26
    2 PP_4371 two component system AtoC DNA-binding transcriptional activator 0.35 0.25
    3 PP_4381 Flagellar hook-associated protein FlgK 0.66 0.25
    4 PP_4378 flagellin, filament structural protein no 0.24
    5 PP_2074 Transcriptional regulator, LysR family no 0.23
    6 PP_4388 Flagellar hook protein FlgE 0.37 0.23
    7 PP_4380 Flagellar hook-associated protein FlgL 0.70 0.23
    8 PP_4376 flagellar filament capping protein 0.71 0.22
    9 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons 0.32 0.22
    10 PP_4356 Flagellar protein FliO no 0.22
    11 PP_4382 Peptidoglycan hydrolase FlgJ 0.35 0.22
    12 PP_4384 Flagellar L-ring protein 0.39 0.22
    13 PP_4370 Flagellar hook-basal body complex protein FliE no 0.22
    14 PP_4369 Flagellar M-ring protein 0.27 0.22
    15 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat no 0.22
    16 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.68 0.22
    17 PP_4366 flagellum-specific ATP synthase 0.39 0.21
    18 PP_4344 flagellar export pore protein 0.35 0.21
    19 PP_4365 Flagellar protein FliJ no 0.21
    20 PP_4359 Flagellar protein FliL 0.33 0.21

    Or look for negative cofitness