• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PP_1501 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Putative lipoprotein in cluster with COG2110

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4246 Periplasmic binding protein no 0.22
    2 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.21
    3 PP_5261 Transcriptional regulator, LysR family no 0.21
    4 PP_0506 putative ABC efflux transporter, permease protein 0.17 0.21
    5 PP_1301 quality control serine endoprotease DegS 0.47 0.19
    6 PP_0046 tyrosine-specific outer membrane porin D no 0.19
    7 PP_3977 conserved protein of unknown function no 0.19
    8 PP_4409 Site-specific recombinase, phage integrase family no 0.18
    9 PP_0033 putative undecaprenyl-glycosyl transferase no 0.18
    10 PP_3790 diaminopimelate epimerase no 0.18
    11 PP_4429 Transcriptional regulator, GntR family no 0.18
    12 PP_0608 putative type 4 fimbrial biogenesis protein no 0.17
    13 PP_5603 putative FAD dependent oxidoreductase no 0.17
    14 PP_3346 Nickel transporter ATP-binding protein no 0.17
    15 PP_5709 protein of unknown function no 0.17
    16 PP_3676 conserved protein of unknown function no 0.17
    17 PP_5690 conserved protein of unknown function no 0.17
    18 PP_4421 putative aminotransferase no 0.17
    19 PP_2531 putative 5-nucleotidase 0.54 0.17
    20 PP_0049 conserved protein of unknown function no 0.17

    Or look for negative cofitness