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Cofit
Protein
Homologs
Top cofit genes for PP_1468 from
Pseudomonas putida KT2440
Tyrosine recombinase XerD
KEGG: integrase/recombinase XerD
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4004
DNA translocase FtsK
0.64
0.45
2
PP
_1217
Holliday junction ATP-dependent DNA helicase RuvB
0.79
0.44
3
PP
_5352
DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex
0.89
0.43
4
PP
_5230
Tyrosine recombinase XerC
0.91
0.41
5
PP
_1216
Holliday junction ATP-dependent DNA helicase RuvA
0.86
0.38
6
PP
_5310
junction-specific ATP-dependent DNA helicase
0.85
0.36
7
PP
_1215
Crossover junction endodeoxyribonuclease RuvC
0.86
0.36
8
PP
_1629
Protein RecA
0.85
0.33
9
PP
_0002
probable chromosome partition protein
0.73
0.30
10
PP
_0123
DNA polymerase I, 5
0.75
0.29
11
PP
_3104
conserved protein of unknown function
no
0.27
12
PP
_3248
Dyp-type peroxidase family protein
no
0.25
13
PP
_2336
aconitate hydratase 1
0.81
0.25
14
PP
_5309
oxidative and nitrosative stress transcriptional dual regulator
0.60
0.25
15
PP
_4799
putative Muramoyltetrapeptide carboxypeptidase
0.40
0.25
16
PP
_1598
regulatory intramembrane protein RIP zinc protease
0.50
0.25
17
PP
_0691
Glutamate 5-kinase
0.72
0.25
18
PP
_4943
putative Glycosyl transferase
0.53
0.24
19
PP
_1994
tRNA pseudouridine (38-40)synthase
0.61
0.24
20
PP
_4589
D-isomer specific 2-hydroxyacid dehydrogenase family protein
no
0.24
Or look for
negative cofitness