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  • Top cofit genes for PP_1453 from Pseudomonas putida KT2440

    putative NUDIX hydrolase with low 3-phosphohydroxypyruvate phosphatase activity
    SEED: Hypothetical nudix hydrolase YeaB

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2889 putative Transmembrane regulator PrtR no 0.37
    2 PP_0598 paraquat-inducible protein A 0.20 0.31
    3 PP_1113 Pyridoxal-phosphate dependent enzyme family protein no 0.30
    4 PP_4171 conserved exported protein of unknown function 0.32 0.30
    5 PP_0599 paraquat-inducible protein B 0.20 0.28
    6 PP_1663 conserved exported protein of unknown function 0.49 0.28
    7 PP_2148 transcription-repair coupling factor 0.67 0.27
    8 PP_2662 conserved exported protein of unknown function 0.52 0.27
    9 PP_2437 putative Acyl-CoA dehydrogenase 0.24 0.26
    10 PP_0355 Response regulator no 0.26
    11 PP_1909 putative septum formation protein 0.45 0.26
    12 PP_1204 putative Lipoprotein 0.17 0.26
    13 PP_5053 Protein-export protein SecB 0.34 0.26
    14 PP_5745 paraquat-inducible protein A 0.44 0.25
    15 PP_1761 diguanylate cyclase with phosphodiesterase domain no 0.25
    16 PP_2387 conserved protein of unknown function no 0.25
    17 PP_2663 conserved protein of unknown function no 0.25
    18 PP_1650 Sensor protein GacS no 0.24
    19 PP_1036 membrane-bound lytic murein transglycosylase F no 0.24
    20 PP_4099 two-componenent system BarA/UvrY - regulatory subunit 0.39 0.24

    Or look for negative cofitness