Top cofit genes for PP_1441 from Pseudomonas putida KT2440

tRNA (cmo5U34)-methyltransferase
SEED: tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase
KEGG: tRNA (cmo5U34)-methyltransferase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2148		transcription-repair coupling factor	0.66	0.32
2	PP_1770		3-phosphoshikimate 1-carboxyvinyltransferase	0.22	0.31
3	PP_1663		conserved exported protein of unknown function	no	0.31
4	PP_0725		conserved hypothetical TPR repeat protein	no	0.30
5	PP_4171		conserved exported protein of unknown function	no	0.29
6	PP_1871		Protease HtpX	no	0.29
7	PP_0960		phospholipid ABC transporter binding protein	0.38	0.29
8	PP_0540		conserved inner membrane protein	0.34	0.29
9	PP_1798		Outer membrane efflux protein	no	0.29
10	PP_1774		conserved exported protein of unknown function	no	0.29
11	PP_1440		tRNA (mo5U34)-methyltransferase	0.95	0.29
12	PP_2163		VacJ lipoprotein	no	0.29
13	PP_0961		toluene tolerance protein	0.60	0.28
14	PP_1627		conserved protein of unknown function	no	0.28
15	PP_0958		phospholipid ABC transporter ATP-binding subunit	0.47	0.28
16	PP_5058		Carboxy-terminal-processing protease	no	0.27
17	PP_0066		Ribosomal RNA small subunit methyltransferase B	0.50	0.27
18	PP_0434		Anhydro-N-acetylmuramic acid kinase	0.25	0.26
19	PP_0405		conserved protein of unknown function	0.26	0.26
20	PP_4172		conserved exported protein of unknown function	no	0.26

Or look for negative cofitness