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  • Top cofit genes for PP_1440 from Pseudomonas putida KT2440

    tRNA (mo5U34)-methyltransferase
    SEED: tRNA (5-methoxyuridine) 34 synthase
    KEGG: tRNA (mo5U34)-methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1355 Muropeptide permease AmpG 0.21 0.33
    2 PP_0405 conserved protein of unknown function 0.21 0.33
    3 PP_1798 Outer membrane efflux protein no 0.33
    4 PP_1204 putative Lipoprotein no 0.33
    5 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.66 0.32
    6 PP_1627 conserved protein of unknown function no 0.32
    7 PP_0434 Anhydro-N-acetylmuramic acid kinase 0.43 0.32
    8 PP_0540 conserved inner membrane protein 0.66 0.32
    9 PP_2148 transcription-repair coupling factor 0.58 0.31
    10 PP_2027 conserved exported protein of unknown function 0.39 0.31
    11 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.66 0.31
    12 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.75 0.30
    13 PP_3627 conserved protein of unknown function no 0.30
    14 PP_1663 conserved exported protein of unknown function 0.28 0.30
    15 PP_0725 conserved hypothetical TPR repeat protein no 0.30
    16 PP_2005 conserved exported protein of unknown function no 0.29
    17 PP_1036 membrane-bound lytic murein transglycosylase F 0.61 0.29
    18 PP_2145 beta-N-acetylglucosaminidase 0.62 0.29
    19 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase 0.60 0.29
    20 PP_5146 RNA pyrophosphohydrolase 0.29 0.29

    Or look for negative cofitness