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  • Top cofit genes for PP_1435 from Pseudomonas putida KT2440

    DNA repair protein RecO
    SEED: DNA recombination and repair protein RecO
    KEGG: DNA repair protein RecO (recombination protein O)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0123 DNA polymerase I, 5 0.68 0.24
    2 PP_1779 Lipopolysaccharide ABC export system, ATP-binding protein no 0.23
    3 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA 0.56 0.22
    4 PP_1778 Lipopolysaccharide ABC export system, permease protein no 0.21
    5 PP_4941 conserved exported protein of unknown function no 0.21
    6 PP_1253 Transcriptional regulator, ArsR family no 0.21
    7 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.41 0.20
    8 PP_4523 putative Agmatinase no 0.20
    9 PP_4944 Carbamoyltransferase 0.23 0.20
    10 PP_4940 Putative glycosyltransferase no 0.19
    11 PP_1058 conserved protein of unknown function no 0.19
    12 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase 0.28 0.19
    13 PP_0002 probable chromosome partition protein 0.46 0.19
    14 PP_1111 putative Synthetase no 0.19
    15 PP_4286 allantoinase 0.30 0.19
    16 PP_1109 Transcriptional regulator, GntR family no 0.19
    17 PP_1110 serine acetyltransferase no 0.18
    18 PP_4849 putative DnaK protein no 0.18
    19 PP_1186 two component system DNA-binding transcriptional dual regulator 0.68 0.18
    20 PP_4058 1,4-alpha-glucan branching enzyme 0.59 0.18

    Or look for negative cofitness