Top cofit genes for PP_1427 from Pseudomonas putida KT2440

RNA polymerase sigma E factor
SEED: RNA polymerase sigma-H factor AlgT
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_1301		quality control serine endoprotease DegS	0.96	0.55
2	PP_4911		conserved protein of unknown function	0.71	0.36
3	PP_0351		putative Transmembrane sensor protein	no	0.26
4	PP_4570		conserved protein of unknown function	0.72	0.24
5	PP_1006		putative outer membrane heme receptor	no	0.24
6	PP_2376		Esterified fatty acid cis/trans isomerase	no	0.23
7	PP_0435		Peptidase, M23/M37 family	0.49	0.22
8	PP_3627		conserved protein of unknown function	no	0.22
9	PP_1309		conserved exported protein of unknown function	0.48	0.22
10	PP_1627		conserved protein of unknown function	no	0.22
11	PP_0066		Ribosomal RNA small subunit methyltransferase B	0.45	0.20
12	PP_1782		dTDP-4-dehydrorhamnose 3,5-epimerase	no	0.20
13	PP_1355		Muropeptide permease AmpG	0.88	0.19
14	PP_0789		N-acetyl-anhydromuramyl-L-alanine-amidase	0.48	0.19
15	PP_0937		endoribonuclease G (RNAse G)	0.86	0.19
16	PP_1798		Outer membrane efflux protein	no	0.19
17	PP_5283		periplasmic dipeptide transport protein	0.67	0.19
18	PP_1634		conserved protein	0.60	0.19
19	PP_4145		Membrane-bound lytic murein transglycosylase D	0.51	0.19
20	PP_3990		substrate or modulator of FtsH-mediated proteolysis	0.67	0.19

Or look for negative cofitness