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  • Top cofit genes for PP_1419 from Pseudomonas putida KT2440

    tricarboxylate-specific outer membrane porin
    SEED: Tricarboxylate porin OpdH

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1420 Transcriptional regulatory protein tctD 0.97 0.64
    2 PP_1421 putative Sensor histidine kinase TctE 0.97 0.64
    3 PP_1418 putative Tricarboxylate transport protein TctC 0.96 0.62
    4 PP_1416 putative Tricarboxylate transport protein TctA 0.97 0.60
    5 PP_1417 putative Tricarboxylate transport protein TctB 0.95 0.53
    6 PP_0147 Citrate transporter 0.98 0.51
    7 PP_4695 Sensory box histidine kinase 0.25 0.28
    8 PP_4613 outer membrane ferric citrate porin no 0.27
    9 PP_3590 aromatic-amino-acid transaminase (EC 2.6.1.57) (from data) no 0.24
    10 PP_1826 Hydrolase, isochorismatase family 0.24 0.23
    11 PP_1304 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase 0.42 0.22
    12 PP_3997 putative Glycosyl transferase no 0.22
    13 PP_1346 Glutamate N-acetyltransferase/Amino-acid acetyltransferase 0.37 0.22
    14 PP_2082 phosphoenolpyruvate synthetase 0.51 0.22
    15 PP_4197 Transcriptional regulator, GntR family 0.43 0.22
    16 PP_1445 carbohydrate-selective porin no 0.21
    17 PP_4767 amino acid exporter for phenylalanine, threonine no 0.21
    18 PP_3527 Transcriptional regulator, TetR family no 0.21
    19 PP_1303 Sulfate adenylyltransferase subunit 2 0.41 0.21
    20 PP_0570 lipoprotein of unknown function no 0.20

    Or look for negative cofitness