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  • Top cofit genes for PP_1413 from Pseudomonas putida KT2440

    Uracil-DNA glycosylase
    SEED: Uracil-DNA glycosylase, family 1
    KEGG: uracil-DNA glycosylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4971 putative Outer membrane-bound lytic murein transglycolase A 0.57 0.23
    2 PP_5284 UPF0758 protein PP_5284 0.37 0.23
    3 PP_0540 conserved inner membrane protein 0.64 0.22
    4 PP_1627 conserved protein of unknown function no 0.21
    5 PP_1774 conserved exported protein of unknown function no 0.21
    6 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.57 0.21
    7 PP_4495 aromatic amino acid transport protein 0.49 0.21
    8 PP_0245 putative transcriptional accessory protein no 0.20
    9 PP_1798 Outer membrane efflux protein no 0.20
    10 PP_5113 predicted Zn-dependent peptidases no 0.20
    11 PP_5086 putative nuclease (SNase domain protein) 0.19 0.20
    12 PP_2030 conserved protein of unknown function no 0.20
    13 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat 0.30 0.19
    14 PP_2027 conserved exported protein of unknown function 0.52 0.19
    15 PP_0352 RNA polymerase sigma-70 factor, ECF subfamily 0.57 0.18
    16 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase 0.40 0.18
    17 PP_4570 conserved protein of unknown function 0.43 0.18
    18 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase no 0.18
    19 PP_3627 conserved protein of unknown function no 0.18
    20 PP_4911 conserved protein of unknown function 0.30 0.18

    Or look for negative cofitness