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  • Top cofit genes for PP_1402 from Pseudomonas putida KT2440

    C4-dicarboxylate transport sensor protein
    SEED: C4-dicarboxylate transport sensor protein
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1400 Alpha-ketoglutarate permease 0.97 0.80
    2 PP_1401 C4-dicarboxylate transport transcriptional regulatory protein 0.94 0.70
    3 PP_2909 glutarate hydroxylase (from data) no 0.47
    4 PP_1403 periplasmic beta-D-glucoside glucohydrolase 0.73 0.44
    5 PP_2910 L-2-hydroxyglutarate oxidase no 0.40
    6 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase no 0.17
    7 PP_0337 Sensory box protein 0.81 0.17
    8 PP_4101 Acetyltransferase, GNAT family no 0.17
    9 PP_1301 quality control serine endoprotease DegS no 0.17
    10 PP_0319 conserved protein of unknown function no 0.16
    11 PP_0885 dipeptide ABC transporter - periplasmic binding protein no 0.16
    12 PP_0525 TonB-dependent receptor, B12 family no 0.15
    13 PP_2307 conserved protein of unknown function no 0.15
    14 PP_2017 aminopeptidase N no 0.15
    15 PP_5495 protein of unknown function no 0.15
    16 PP_0914 GGDEF domain protein 0.87 0.14
    17 PP_3678 conserved protein of unknown function no 0.14
    18 PP_1422 conserved protein of unknown function 0.78 0.14
    19 PP_5322 putative metal ion transporter no 0.14
    20 PP_0151 conserved exported protein of unknown function no 0.14

    Or look for negative cofitness