Top cofit genes for PP_1401 from Pseudomonas putida KT2440

C4-dicarboxylate transport transcriptional regulatory protein
SEED: Nitrogen regulation protein NR(I)
KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_1400		Alpha-ketoglutarate permease	0.96	0.72
2	PP_1402		C4-dicarboxylate transport sensor protein	0.94	0.70
3	PP_2909		glutarate hydroxylase (from data)	no	0.41
4	PP_1403		periplasmic beta-D-glucoside glucohydrolase	no	0.37
5	PP_2910		L-2-hydroxyglutarate oxidase	no	0.36
6	PP_0885		dipeptide ABC transporter - periplasmic binding protein	0.31	0.20
7	PP_2307		conserved protein of unknown function	no	0.20
8	PP_5090		putative cell division protein	no	0.19
9	PP_4509		conserved protein of unknown function	no	0.18
10	PP_3821		UTP-glucose-1-phosphate uridylyltransferase	no	0.17
11	PP_4940		Putative glycosyltransferase	no	0.17
12	PP_2813		BNR domain protein	no	0.17
13	PP_1778		Lipopolysaccharide ABC export system, permease protein	no	0.17
14	PP_5495		protein of unknown function	no	0.16
15	PP_1063		DNA-binding transcriptional regulator, homocysteine-binding	no	0.16
16	PP_4470		putative transcriptional regulator (Arc domain-containing)	0.74	0.16
17	PP_2714		Sensor histidine kinase	no	0.15
18	PP_3790		diaminopimelate epimerase	no	0.15
19	PP_0506		putative ABC efflux transporter, permease protein	no	0.15
20	PP_1253		Transcriptional regulator, ArsR family	no	0.15

Or look for negative cofitness