Top cofit genes for PP_1391 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: LysR-family transcriptional regulator clustered with PA0057

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2187		Universal stress protein family	0.29	0.20
2	PP_0534		putative Transcriptional regulator PfeR	no	0.20
3	PP_1756		conserved exported protein of unknown function	no	0.19
4	PP_4405		Sensory box protein	no	0.19
5	PP_5605		conserved exported protein of unknown function	no	0.18
6	PP_3175		putative Dioxygenase, ferredoxin reductase component	no	0.18
7	PP_4319		conserved exported protein of unknown function	no	0.18
8	PP_1631		conserved protein of unknown function	no	0.17
9	PP_2592		Ferric siderophore ABC transporter, ATP-binding protein	0.29	0.17
10	PP_2709		putative Long-chain-fatty-acid--CoA ligase	no	0.17
11	PP_2880		Transcriptional regulator, TetR family	0.13	0.17
12	PP_4412		conserved protein of unknown function	no	0.17
13	PP_3496		Endoribonuclease L-PSP	no	0.17
14	PP_1969		putative Molybdenum cofactor biosynthesis protein A	no	0.17
15	PP_3742		Glutathione S-transferase family protein	no	0.17
16	PP_1072		Leucine-rich repeat domain protein	no	0.16
17	PP_4297		glyoxylate carboligase	0.21	0.16
18	PP_2593		Ferric siderophore ABC transporter, permease protein	no	0.16
19	PP_2060		DNA-binding transcriptional dual regulator - SoxR-reversible one-electron oxidation of its [2Fe-2S] cluster, NADPH-dependent	0.24	0.16
20	PP_4246		Periplasmic binding protein	0.16	0.16

Or look for negative cofitness