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  • Top cofit genes for PP_1389 from Pseudomonas putida KT2440

    Oxaloacetate decarboxylase
    SEED: carboxyphosphonoenolpyruvate phosphonomutase, putative
    KEGG: carboxyvinyl-carboxyphosphonate phosphorylmutase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1367 formyltetrahydrofolate hydrolase 0.21 0.30
    2 PP_0495 type 1 L-asparaginase 0.23 0.29
    3 PP_4507 potassium transporter 0.27 0.28
    4 PP_4379 Beta-ketoacyl-acyl-carrier-protein synthase I 0.35 0.26
    5 PP_4941 conserved exported protein of unknown function 0.37 0.26
    6 PP_5337 LysR family transcriptional regulator 0.36 0.24
    7 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase no 0.24
    8 PP_4546 ATP-dependent helicase HrpA 0.17 0.24
    9 PP_2329 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex no 0.24
    10 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) no 0.23
    11 PP_4942 conserved protein of unknown function no 0.23
    12 PP_1226 pre-queuosine 0 synthase 0.26 0.23
    13 PP_2144 Transcriptional regulator, TetR family 0.28 0.23
    14 PP_1623 RNA polymerase, sigma S (sigma 38) factor no 0.22
    15 PP_0496 Sodium/alanine symporter no 0.22
    16 PP_0504 Outer membrane protein OprG 0.20 0.21
    17 PP_0135 conserved exported protein of unknown function 0.23 0.21
    18 PP_4684 conserved protein of unknown function with kinase-like domain no 0.20
    19 PP_0123 DNA polymerase I, 5 no 0.20
    20 PP_1099 Cold shock protein CapB no 0.20

    Or look for negative cofitness