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  • Top cofit genes for PP_1388 from Pseudomonas putida KT2440

    Drug resistance transporter, EmrB/QacA family
    SEED: drug resistance transporter, EmrB/QacA family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0020 hypothetical protein no 0.20
    2 PP_4246 Periplasmic binding protein 0.15 0.18
    3 PP_4658 putative methyl-accepting chemotaxis protein 0.17 0.18
    4 PP_3127 putative Exopolysaccharide transport protein no 0.17
    5 PP_0947 conserved membrane protein of unknown function no 0.16
    6 PP_0731 phosphatidylcholine synthase no 0.16
    7 PP_2163 VacJ lipoprotein no 0.16
    8 PP_4050 glycogen synthase no 0.15
    9 PP_2070 Transcriptional regulator, AraC family 0.17 0.15
    10 PP_2511 conserved protein of unknown function no 0.15
    11 PP_3287 transcriptional regulator with 4Fe-4S cluster; Crp/Fnr family no 0.15
    12 PP_1879 conserved protein of unknown function no 0.15
    13 PP_3255 non-homologous end joining protein 0.26 0.14
    14 PP_3578 phosphoglucomutase 0.30 0.14
    15 PP_0599 paraquat-inducible protein B no 0.14
    16 PP_5242 Sensor histidine kinase/GAF domain protein 0.57 0.14
    17 PP_0706 fused O(6)-alkylguanine DNA alkyltransferase - transcriptional activator no 0.14
    18 PP_1444 quinoprotein glucose dehydrogenase no 0.14
    19 PP_3268 MutT/nudix family protein 0.22 0.14
    20 PP_4051 malto-oligosyltrehalose trehalohydrolase no 0.14

    Or look for negative cofitness