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Cofit
Protein
Homologs
Top cofit genes for PP_1382 from
Pseudomonas putida KT2440
putative porin-encoding gene
SEED: FIG028593: membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_0247
Osmolarity sensor protein EnvZ
0.16
0.25
2
PP
_0214
4-aminobutyrate aminotransferase
no
0.24
3
PP
_0697
ribosomal-protein-S18-alanine N-acetyltransferase
0.52
0.24
4
PP
_2223
conserved protein of unknown function
no
0.23
5
PP
_5294
Ribonuclease PH
0.36
0.23
6
PP
_4722
Transcription elongation factor GreA
no
0.23
7
PP
_0887
Sensor histidine kinase
no
0.22
8
PP
_0832
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
no
0.22
9
PP
_3758
Response regulator/sensor histidine kinase
no
0.22
10
PP
_5064
choline dehydrogenase
no
0.22
11
PP
_4546
ATP-dependent helicase HrpA
0.13
0.22
12
PP
_1786
putative Glycosyl transferase
no
0.22
13
PP
_1226
pre-queuosine 0 synthase
no
0.21
14
PP
_5028
proline iminopeptidase
0.20
0.21
15
PP
_5198
conserved protein of unknown function
no
0.21
16
PP
_0498
conserved protein of unknown function
no
0.21
17
PP
_1126
putative Hydrolase
no
0.21
18
PP
_2319
conserved protein of unknown function
no
0.21
19
PP
_4939
conserved protein of unknown function
no
0.21
20
PP
_2448
Gamma-glutamylputrescine oxidase (EC 1.4.3.-)
(from data)
no
0.21
Or look for
negative cofitness