Top cofit genes for PP_1375 from Pseudomonas putida KT2440

transcription regulatory protein (pca regulon)
SEED: Pca regulon regulatory protein PcaR
KEGG: IclR family transcriptional regulator, pca regulon regulatory protein

Rank Hit Name Description Conserved? Cofitness  
1 PP_1380 3-oxoadipate enol-lactonase 2 0.97 0.93
2 PP_3952 3-oxoadipate CoA-transferase subunit A 0.54 0.91
3 PP_1377 beta-ketoadipyl-CoA thiolase 0.91 0.90
4 PP_3951 3-oxoadipate CoA-transferase subunit A 0.55 0.89
5 PP_1379 3-carboxy-cis,cis-muconate cycloisomerase 0.94 0.88
6 PP_4655 protocatechuate 3,4-dioxygenase alpha chain 0.96 0.87
7 PP_4656 protocatechuate 3,4-dioxygenase beta chain 0.96 0.86
8 PP_1378 alpha-ketoglutarate permease 0.94 0.85
9 PP_1713 Transcriptional regulator PcaQ 0.38 0.65
10 PP_1381 4-carboxymuconolactone decarboxylase 0.95 0.62
11 PP_3736 vanillate O-demethylase oxygenase subunit no 0.58
12 PP_3737 vanillate O-demethylase oxidoreductase 0.40 0.58
13 PP_1376 4-hydroxybenzoate transporter 0.60 0.53
14 PP_3356 p-coumarate CoA-ligase (EC 6.2.1.12) (from data) 0.79 0.47
15 PP_3590 aromatic-amino-acid transaminase (EC 2.6.1.57) (from data) 0.43 0.46
16 PP_1616 formaldehyde dehydrogenase, glutathione-dependent no 0.46
17 PP_3358 hydroxycinnamoyl-CoA hydratase-lyase (EC 4.1.2.61) (from data) 0.77 0.42
18 PP_2354 Sensory box histidine kinase/response regulator no 0.42
19 PP_3537 p-hydroxybenzoate hydroxylase 0.87 0.41
20 PP_3357 p-hydroxybenzaldehyde dehydrogenase vdh (EC 1.2.1.64) (from data) 0.75 0.40

Or look for negative cofitness