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  • Top cofit genes for PP_1344 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1598 regulatory intramembrane protein RIP zinc protease no 0.19
    2 PP_4560 putative Ribonuclease BN no 0.19
    3 PP_5706 Sec translocation complex - SecG subunit no 0.18
    4 PP_t29 tRNA-Ala no 0.18
    5 PP_4546 ATP-dependent helicase HrpA no 0.17
    6 PP_t12 tRNA-Thr no 0.16
    7 PP_4204 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor no 0.16
    8 PP_1734 Probable septum site-determining protein MinC no 0.15
    9 PP_4264 oxygen-independent coproporphyrinogen III dehydrogenase no 0.15
    10 PP_1206 basic-amino-acid specific porin OprD no 0.15
    11 PP_4874 50S ribosomal protein L9 no 0.15
    12 PP_1870 putative thiopurine S-methyltransferase no 0.15
    13 PP_5309 oxidative and nitrosative stress transcriptional dual regulator no 0.14
    14 PP_4880 exoribonuclease R no 0.14
    15 PP_0806 putative Surface adhesion protein no 0.14
    16 PP_0385 putative serine acetyltransferase no 0.14
    17 PP_1004 conserved protein of unknown function no 0.14
    18 PP_0856 conserved lipoprotein of unknown function no 0.14
    19 PP_0888 Photosynthetic apparatus regulatory protein RegA no 0.14
    20 PP_4471 Magnesium transporter no 0.14

    Or look for negative cofitness