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  • Top cofit genes for PP_1287 from Pseudomonas putida KT2440

    Glycosyltransferase alg8
    SEED: Alginate biosynthesis protein Alg8

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5283 periplasmic dipeptide transport protein 0.66 0.41
    2 PP_4726 Chaperone protein DnaJ no 0.39
    3 PP_1871 Protease HtpX 0.46 0.38
    4 PP_1627 conserved protein of unknown function no 0.38
    5 PP_0066 Ribosomal RNA small subunit methyltransferase B no 0.38
    6 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase no 0.38
    7 PP_1798 Outer membrane efflux protein no 0.38
    8 PP_1797 HlyD family secretion protein 0.28 0.37
    9 PP_1663 conserved exported protein of unknown function 0.36 0.37
    10 PP_2148 transcription-repair coupling factor 0.30 0.37
    11 PP_4872 putative enzyme of unknown function 0.40 0.37
    12 PP_0540 conserved inner membrane protein 0.24 0.36
    13 PP_5284 UPF0758 protein PP_5284 no 0.35
    14 PP_3627 conserved protein of unknown function no 0.34
    15 PP_1777 phosphomannomutase no 0.34
    16 PP_0405 conserved protein of unknown function no 0.33
    17 PP_1355 Muropeptide permease AmpG 0.44 0.33
    18 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.33
    19 PP_4720 putative RNA binding protein no 0.32
    20 PP_0435 Peptidase, M23/M37 family no 0.32

    Or look for negative cofitness