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  • Top cofit genes for PP_1286 from Pseudomonas putida KT2440

    Alginate biosynthesis protein Alg44
    SEED: Alginate biosynthesis protein Alg44

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.22
    2 PP_0794 1-phosphofructokinase monomer no 0.21
    3 PP_4022 conserved protein of unknown function no 0.20
    4 PP_1030 conserved protein of unknown function 0.28 0.20
    5 PP_4080 conserved protein of unknown function no 0.18
    6 PP_2034 conserved membrane protein of unknown function no 0.18
    7 PP_t49 tRNA-Met no 0.18
    8 PP_5113 predicted Zn-dependent peptidases no 0.18
    9 PP_1072 Leucine-rich repeat domain protein no 0.18
    10 PP_0089 stress-induced peroxiredoxin, lipoyl-dependent peroxidase no 0.17
    11 PP_4495 aromatic amino acid transport protein no 0.17
    12 PP_2005 conserved exported protein of unknown function no 0.17
    13 PP_3567 Transcriptional regulator, LysR family no 0.17
    14 PP_2072 Transcriptional regulator, AraC family no 0.17
    15 PP_4176 putative 5-oxo-L-prolinase 0.36 0.17
    16 PP_4100 Transcriptional regulator, Cro/CI family no 0.16
    17 PP_1406 conserved protein of unknown function no 0.16
    18 PP_4171 conserved exported protein of unknown function 0.31 0.16
    19 PP_2043 conserved exported protein of unknown function no 0.16
    20 PP_2045 Metallo-beta-lactamase family protein no 0.16

    Or look for negative cofitness