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  • Top cofit genes for PP_1283 from Pseudomonas putida KT2440

    poly(beta-D-mannuronate) C5 epimerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1627 conserved protein of unknown function no 0.33
    2 PP_5283 periplasmic dipeptide transport protein 0.70 0.32
    3 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.30
    4 PP_1281 Alginate lyase 0.73 0.30
    5 PP_5279 conserved protein of unknown function no 0.30
    6 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) no 0.30
    7 PP_1798 Outer membrane efflux protein no 0.29
    8 PP_1774 conserved exported protein of unknown function no 0.29
    9 PP_2148 transcription-repair coupling factor 0.31 0.29
    10 PP_5284 UPF0758 protein PP_5284 no 0.29
    11 PP_1777 phosphomannomutase no 0.28
    12 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase no 0.28
    13 PP_4872 putative enzyme of unknown function no 0.27
    14 PP_1204 putative Lipoprotein no 0.27
    15 PP_0540 conserved inner membrane protein 0.19 0.27
    16 PP_4726 Chaperone protein DnaJ no 0.27
    17 PP_1803 UDP-sugar epimerase no 0.27
    18 PP_1702 Recombination-associated protein RdgC no 0.26
    19 PP_1797 HlyD family secretion protein no 0.26
    20 PP_5113 predicted Zn-dependent peptidases 0.47 0.26

    Or look for negative cofitness