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  • Top cofit genes for PP_1280 from Pseudomonas putida KT2440

    Probable alginate O-acetylase AlgI
    SEED: Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1798 Outer membrane efflux protein no 0.29
    2 PP_4781 Sensor histidine kinase no 0.29
    3 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.40 0.28
    4 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent no 0.27
    5 PP_1871 Protease HtpX 0.22 0.26
    6 PP_1627 conserved protein of unknown function no 0.26
    7 PP_4971 putative Outer membrane-bound lytic murein transglycolase A no 0.25
    8 PP_0540 conserved inner membrane protein 0.55 0.25
    9 PP_1774 conserved exported protein of unknown function no 0.24
    10 PP_1797 HlyD family secretion protein no 0.24
    11 PP_3627 conserved protein of unknown function no 0.23
    12 PP_0941 putative ribosome associated protein no 0.22
    13 PP_1803 UDP-sugar epimerase 0.64 0.22
    14 PP_1663 conserved exported protein of unknown function no 0.22
    15 PP_1279 Probable alginate O-acetylase AlgJ 0.84 0.22
    16 PP_5283 periplasmic dipeptide transport protein 0.72 0.22
    17 PP_1524 23S rRNA m1G745 methyltransferase no 0.21
    18 PP_2428 Probable sugar efflux transporter 0.28 0.20
    19 PP_5284 UPF0758 protein PP_5284 no 0.20
    20 PP_0564 conserved protein of unknown function no 0.20

    Or look for negative cofitness