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  • Top cofit genes for PP_1278 from Pseudomonas putida KT2440

    Alginate biosynthesis protein AlgF

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1281 Alginate lyase 0.70 0.22
    2 PP_t49 tRNA-Met no 0.20
    3 PP_0830 Acetyltransferase, GNAT family no 0.19
    4 PP_0866 putative Transmembrane sensor no 0.19
    5 PP_1204 putative Lipoprotein 0.41 0.19
    6 PP_0584 Methyl-accepting chemotaxis transducer no 0.18
    7 PP_1871 Protease HtpX 0.30 0.18
    8 PP_2933 GSH-dependent disulfide bond oxidoreductase no 0.18
    9 PP_5113 predicted Zn-dependent peptidases 0.43 0.18
    10 PP_0725 conserved hypothetical TPR repeat protein 0.30 0.17
    11 PP_1627 conserved protein of unknown function 0.35 0.17
    12 PP_1798 Outer membrane efflux protein no 0.17
    13 PP_0706 fused O(6)-alkylguanine DNA alkyltransferase - transcriptional activator no 0.17
    14 PP_1774 conserved exported protein of unknown function no 0.17
    15 PP_4171 conserved exported protein of unknown function 0.47 0.17
    16 PP_5112 putative processin peptidase 0.27 0.17
    17 PP_1454 conserved protein of unknown function no 0.16
    18 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.14 0.16
    19 PP_4850 conserved membrane protein of unknown function no 0.16
    20 PP_4971 putative Outer membrane-bound lytic murein transglycolase A no 0.16

    Or look for negative cofitness