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  • Top cofit genes for PP_1268 from Pseudomonas putida KT2440

    putative HtrA suppressor protein sohA

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4204 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor no 0.39
    2 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase 0.83 0.31
    3 PP_0872 Peptide chain release factor 3 no 0.30
    4 PP_2148 transcription-repair coupling factor 0.95 0.30
    5 PP_4517 conserved protein of unknown function no 0.29
    6 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) 0.19 0.28
    7 PP_4980 ATP-dependent RNA helicase no 0.28
    8 PP_1702 Recombination-associated protein RdgC 0.51 0.28
    9 PP_4766 ATP-dependent RNA helicase no 0.27
    10 PP_2299 Trigger factor no 0.27
    11 PP_4880 exoribonuclease R 0.18 0.27
    12 PP_4008 ATP-dependent serine protease no 0.25
    13 PP_4874 50S ribosomal protein L9 0.24 0.25
    14 PP_5045 tRNA sulfurtransferase no 0.25
    15 PP_5310 junction-specific ATP-dependent DNA helicase no 0.25
    16 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.43 0.25
    17 PP_4944 Carbamoyltransferase no 0.24
    18 PP_1663 conserved exported protein of unknown function no 0.24
    19 PP_0850 Dual-specificity RNA methyltransferase RlmN no 0.24
    20 PP_4726 Chaperone protein DnaJ 0.48 0.24

    Or look for negative cofitness