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Cofit
Protein
Homologs
Top cofit genes for PP_1268 from
Pseudomonas putida KT2440
putative HtrA suppressor protein sohA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4204
antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor
no
0.39
2
PP
_5084
penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase
0.83
0.31
3
PP
_0872
Peptide chain release factor 3
no
0.30
4
PP
_2148
transcription-repair coupling factor
0.95
0.30
5
PP
_4517
conserved protein of unknown function
no
0.29
6
PP
_5101
coproporphyrinogen/heterocyclic compound oxidase (aerobic)
0.19
0.28
7
PP
_4980
ATP-dependent RNA helicase
no
0.28
8
PP
_1702
Recombination-associated protein RdgC
0.51
0.28
9
PP
_4766
ATP-dependent RNA helicase
no
0.27
10
PP
_2299
Trigger factor
no
0.27
11
PP
_4880
exoribonuclease R
0.18
0.27
12
PP
_4008
ATP-dependent serine protease
no
0.25
13
PP
_4874
50S ribosomal protein L9
0.24
0.25
14
PP
_5045
tRNA sulfurtransferase
no
0.25
15
PP
_5310
junction-specific ATP-dependent DNA helicase
no
0.25
16
PP
_4892
integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex
0.43
0.25
17
PP
_4944
Carbamoyltransferase
no
0.24
18
PP
_1663
conserved exported protein of unknown function
no
0.24
19
PP
_0850
Dual-specificity RNA methyltransferase RlmN
no
0.24
20
PP
_4726
Chaperone protein DnaJ
0.48
0.24
Or look for
negative cofitness