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  • Top cofit genes for PP_1253 from Pseudomonas putida KT2440

    Transcriptional regulator, ArsR family
    SEED: Transcriptional regulator, ArsR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.34
    2 PP_0506 putative ABC efflux transporter, permease protein no 0.28
    3 PP_3788 putative Non-ribosomal peptide synthetase no 0.28
    4 PP_3790 diaminopimelate epimerase no 0.28
    5 PP_2645 magnesium transporter, ATP-dependent 0.49 0.25
    6 PP_2714 Sensor histidine kinase no 0.24
    7 PP_3787 conserved protein of unknown function no 0.24
    8 PP_3612 putative TonB-dependent receptor no 0.23
    9 PP_2646 conserved protein of unknown function no 0.23
    10 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase no 0.23
    11 PP_0120 putative zinc ABC transporter no 0.23
    12 PP_1111 putative Synthetase no 0.23
    13 PP_3244 Magnesium transporter, MgtC family 0.68 0.23
    14 PP_3062 putative Pyocin R2_PP, tail length determination protein no 0.22
    15 PP_1110 serine acetyltransferase no 0.22
    16 PP_3786 aminotransferase no 0.22
    17 PP_1109 Transcriptional regulator, GntR family no 0.22
    18 PP_3376 putative phosphonate dehydrogenase no 0.22
    19 PP_4897 N-acetylmuramoyl-L-alanine amidase no 0.21
    20 PP_1532 putative Phage integrase no 0.21

    Or look for negative cofitness