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  • Top cofit genes for PP_1237 from Pseudomonas putida KT2440

    4-hydroxy-tetrahydrodipicolinate synthase
    SEED: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
    KEGG: dihydrodipicolinate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4560 putative Ribonuclease BN no 0.30
    2 PP_0856 conserved lipoprotein of unknown function 0.87 0.30
    3 PP_0855 conserved protein of unknown function 0.54 0.28
    4 PP_1238 putative Lipoprotein 0.58 0.27
    5 PP_0393 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase no 0.26
    6 PP_4204 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor no 0.26
    7 PP_3427 Multidrug efflux RND outer membrane protein OprN no 0.26
    8 PP_1783 dTDP-glucose pyrophosphorylase no 0.26
    9 PP_4880 exoribonuclease R 0.22 0.26
    10 PP_4265 DNA-binding transcriptional dual regulator no 0.25
    11 PP_4902 Oligoribonuclease no 0.25
    12 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.65 0.24
    13 PP_1719 Tail-specific protease prc 0.45 0.23
    14 PP_4895 tRNA dimethylallyltransferase 0.43 0.23
    15 PP_1000 ornithine carbamoyltransferase, catabolic no 0.23
    16 PP_4693 RNA polymerase-binding transcription factor DksA 0.53 0.23
    17 PP_1001 arginine deiminase no 0.23
    18 PP_5706 Sec translocation complex - SecG subunit no 0.23
    19 PP_1353 conserved membrane protein of unknown function no 0.22
    20 PP_4546 ATP-dependent helicase HrpA no 0.22

    Or look for negative cofitness