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  • Top cofit genes for PP_1234 from Pseudomonas putida KT2440

    putative permease
    SEED: Putative permease PerM (= YfgO)
    KEGG: putative permease

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4710 tRNA pseudouridine 55 synthase 0.29 0.37
    2 PP_1309 conserved exported protein of unknown function no 0.33
    3 PP_4900 epoxyqueuosine reductase 0.26 0.31
    4 PP_0680 ATP-dependent protease-like protein 0.25 0.28
    5 PP_5160 conserved exported protein of unknown function 0.31 0.28
    6 PP_0749 conserved exported protein of unknown function 0.70 0.28
    7 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.32 0.28
    8 PP_4785 conserved exported protein of unknown function 0.31 0.28
    9 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.35 0.28
    10 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.43 0.27
    11 PP_1014 aldose-ketose isomerase 0.51 0.27
    12 PP_2223 conserved protein of unknown function 0.27 0.26
    13 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.46 0.26
    14 PP_2245 Transcriptional regulator, Cro/CI family no 0.25
    15 PP_3417 D-gluconate transporter no 0.25
    16 PP_3244 Magnesium transporter, MgtC family no 0.25
    17 PP_0353 Exonuclease no 0.24
    18 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein 0.52 0.24
    19 PP_3428 conserved protein of unknown function containing tetratricopeptide repeat domain 0.45 0.24
    20 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.74 0.23

    Or look for negative cofitness