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  • Top cofit genes for PP_1229 from Pseudomonas putida KT2440

    putrescine permease
    SEED: Putrescine importer

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5136 ABC transporter, permease protein no 0.25
    2 PP_1072 Leucine-rich repeat domain protein no 0.25
    3 PP_0924 conserved protein of unknown function no 0.21
    4 PP_0207 putative Nitrate ABC transporter, periplasmic nitrate-binding protein no 0.20
    5 PP_0083 tryptophan synthase beta chain 0.19 0.19
    6 PP_4686 putative lipoprotein no 0.19
    7 PP_4312 conserved exported protein of unknown function no 0.19
    8 PP_4220 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.19
    9 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.57 0.19
    10 PP_2685 conserved protein of unknown function no 0.18
    11 PP_2072 Transcriptional regulator, AraC family no 0.18
    12 PP_2593 Ferric siderophore ABC transporter, permease protein no 0.18
    13 PP_2236 putative hydrolase of the alpha/beta superfamily no 0.18
    14 PP_0210 putative Phycobiliprotein no 0.18
    15 PP_3857 conserved protein of unknown function no 0.18
    16 PP_2543 gamma-aminobutyrate permease no 0.18
    17 PP_0049 conserved protein of unknown function no 0.18
    18 PP_1679 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase no 0.18
    19 PP_2187 Universal stress protein family no 0.18
    20 PP_3291 Metallo-beta-lactamase family protein no 0.18

    Or look for negative cofitness