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  • Top cofit genes for PP_1218 from Pseudomonas putida KT2440

    putative acyl-CoA thioesterase
    SEED: 4-hydroxybenzoyl-CoA thioesterase family active site
    KEGG: 4-hydroxybenzoyl-CoA thioesterase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3069 Outer membrane autotransporter no 0.16
    2 PP_5688 putative NAD(FAD)-dependent dehydrogenase with Fer2_4 domain no 0.15
    3 PP_0231 taurine ABC transporter permease subunit no 0.15
    4 PP_2894 conserved protein of unknown function no 0.14
    5 PP_3837 inner membrane protein of unknown function no 0.14
    6 PP_5055 Sulfurtransferase 0.73 0.14
    7 PP_5687 putative permease of the major facilitator superfamily no 0.14
    8 PP_4584 putative endonuclease no 0.14
    9 PP_2348 Sensor histidine kinase no 0.13
    10 PP_5000 peptidase component of the ATP-dependent HslVU protease 0.40 0.13
    11 PP_3078 putative ABC transporter, periplasmic binding protein 0.44 0.13
    12 PP_2893 conserved exported protein of unknown function 0.70 0.13
    13 PP_2309 conserved protein of unknown function no 0.13
    14 PP_0105 Cytochrome C oxidase assembly protein 0.46 0.13
    15 PP_5054 glutaredoxin 3 0.45 0.13
    16 PP_4589 D-isomer specific 2-hydroxyacid dehydrogenase family protein 0.61 0.13
    17 PP_2549 conserved protein of unknown function no 0.13
    18 PP_2513 4-oxalomesaconate tautomerase 0.41 0.13
    19 PP_3185 Pet18 protein no 0.12
    20 PP_0307 conserved exported protein of unknown function no 0.12

    Or look for negative cofitness