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  • Top cofit genes for PP_1216 from Pseudomonas putida KT2440

    Holliday junction ATP-dependent DNA helicase RuvA
    SEED: Holliday junction DNA helicase RuvA
    KEGG: holliday junction DNA helicase RuvA

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.87 0.57
    2 PP_4004 DNA translocase FtsK 0.79 0.53
    3 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.88 0.49
    4 PP_5310 junction-specific ATP-dependent DNA helicase 0.87 0.47
    5 PP_5230 Tyrosine recombinase XerC 0.83 0.45
    6 PP_1215 Crossover junction endodeoxyribonuclease RuvC 0.92 0.44
    7 PP_1629 Protein RecA 0.76 0.40
    8 PP_3248 Dyp-type peroxidase family protein 0.30 0.39
    9 PP_1734 Probable septum site-determining protein MinC 0.28 0.39
    10 PP_1468 Tyrosine recombinase XerD 0.86 0.38
    11 PP_0002 probable chromosome partition protein 0.71 0.37
    12 PP_0123 DNA polymerase I, 5 0.61 0.36
    13 PP_4943 putative Glycosyl transferase 0.52 0.35
    14 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.72 0.34
    15 PP_1733 membrane ATPase of the MinC-MinD-MinE system 0.82 0.33
    16 PP_4124 NADH-quinone oxidoreductase subunit G 0.64 0.31
    17 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.64 0.30
    18 PP_4120 NADH-quinone oxidoreductase subunit B 0.61 0.29
    19 PP_1036 membrane-bound lytic murein transglycosylase F 0.39 0.28
    20 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 0.61 0.28

    Or look for negative cofitness