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  • Top cofit genes for PP_1215 from Pseudomonas putida KT2440

    Crossover junction endodeoxyribonuclease RuvC
    SEED: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
    KEGG: crossover junction endodeoxyribonuclease RuvC

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.88 0.55
    2 PP_4004 DNA translocase FtsK 0.75 0.49
    3 PP_5310 junction-specific ATP-dependent DNA helicase 0.78 0.47
    4 PP_5230 Tyrosine recombinase XerC 0.80 0.46
    5 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA 0.92 0.45
    6 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.89 0.41
    7 PP_1734 Probable septum site-determining protein MinC 0.42 0.39
    8 PP_0123 DNA polymerase I, 5 0.64 0.37
    9 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.70 0.36
    10 PP_1468 Tyrosine recombinase XerD 0.86 0.36
    11 PP_1629 Protein RecA 0.84 0.34
    12 PP_4124 NADH-quinone oxidoreductase subunit G 0.68 0.31
    13 PP_3248 Dyp-type peroxidase family protein no 0.31
    14 PP_1733 membrane ATPase of the MinC-MinD-MinE system 0.53 0.31
    15 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.52 0.30
    16 PP_1598 regulatory intramembrane protein RIP zinc protease 0.67 0.30
    17 PP_1783 dTDP-glucose pyrophosphorylase 0.55 0.29
    18 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 0.46 0.29
    19 PP_5706 Sec translocation complex - SecG subunit no 0.29
    20 PP_5045 tRNA sulfurtransferase no 0.28

    Or look for negative cofitness