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  • Top cofit genes for PP_1204 from Pseudomonas putida KT2440

    putative Lipoprotein
    SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1627 conserved protein of unknown function no 0.73
    2 PP_1798 Outer membrane efflux protein no 0.73
    3 PP_1871 Protease HtpX 0.61 0.71
    4 PP_2148 transcription-repair coupling factor no 0.70
    5 PP_4198 OmpA family protein 0.94 0.69
    6 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.37 0.69
    7 PP_1663 conserved exported protein of unknown function 0.57 0.67
    8 PP_1774 conserved exported protein of unknown function no 0.66
    9 PP_0540 conserved inner membrane protein 0.90 0.66
    10 PP_1777 phosphomannomutase no 0.64
    11 PP_3627 conserved protein of unknown function no 0.63
    12 PP_5058 Carboxy-terminal-processing protease 0.87 0.62
    13 PP_0725 conserved hypothetical TPR repeat protein 0.89 0.62
    14 PP_5283 periplasmic dipeptide transport protein 0.65 0.61
    15 PP_1803 UDP-sugar epimerase 0.59 0.61
    16 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.77 0.60
    17 PP_1797 HlyD family secretion protein no 0.60
    18 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.59
    19 PP_5113 predicted Zn-dependent peptidases 0.83 0.57
    20 PP_1800 Oxidoreductase Rmd no 0.56

    Or look for negative cofitness