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  • Top cofit genes for PP_1201 from Pseudomonas putida KT2440

    conserved exported protein of unknown function
    SEED: Type IV secretory pathway, VirJ component

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1202 putative enzyme involved in modification of phospholipids 0.95 0.85
    2 PP_2320 conserved exported protein of unknown function 0.45 0.59
    3 PP_1460 putative Membrane protein 0.22 0.54
    4 PP_4755 Outer membrane ferrichrome-iron receptor no 0.50
    5 PP_4610 conserved protein of unknown function containing PepSY-associated TM helix domain no 0.49
    6 PP_5218 DedA family protein 0.49 0.47
    7 PP_2322 Major outer membrane lipoprotein 0.32 0.45
    8 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily no 0.45
    9 PP_1719 Tail-specific protease prc 0.33 0.42
    10 PP_4592 putative metal dependent hydrolase no 0.40
    11 PP_1598 regulatory intramembrane protein RIP zinc protease 0.82 0.38
    12 PP_1238 putative Lipoprotein 0.41 0.38
    13 PP_0938 conserved protein of unknown function 0.65 0.38
    14 PP_1019 carbohydrate-selective porin 0.32 0.37
    15 PP_2906 Sensor histidine kinase 0.57 0.37
    16 PP_0995 conserved membrane protein of unknown function no 0.36
    17 PP_0707 putative membrane protein no 0.33
    18 PP_1695 putative Sodium-solute symporter/sensory box histidine kinase/response regulator no 0.33
    19 PP_1843 Mg2+/Co2+ transporter no 0.32
    20 PP_1587 NhaP-type Na+/H+ and K+/H+ antiporters no 0.32

    Or look for negative cofitness