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  • Top cofit genes for PP_1187 from Pseudomonas putida KT2440

    sensor protein
    SEED: Sensor protein PhoQ (EC 2.7.13.3)
    KEGG: two-component system, OmpR family, sensor histidine kinase PhoQ

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4265 DNA-binding transcriptional dual regulator 0.39 0.49
    2 PP_0856 conserved lipoprotein of unknown function 0.90 0.48
    3 PP_0998 conserved protein of unknown function no 0.40
    4 PP_1185 Outer membrane protein H1 0.76 0.39
    5 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase 0.85 0.39
    6 PP_1186 two component system DNA-binding transcriptional dual regulator 0.99 0.36
    7 PP_4204 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor 0.40 0.35
    8 PP_0938 conserved protein of unknown function no 0.35
    9 PP_4560 putative Ribonuclease BN 0.62 0.33
    10 PP_2299 Trigger factor 0.39 0.33
    11 PP_1001 arginine deiminase 0.39 0.33
    12 PP_0180 putative cytochrome c family protein 0.63 0.32
    13 PP_4008 ATP-dependent serine protease 0.32 0.32
    14 PP_0855 conserved protein of unknown function 0.59 0.32
    15 PP_0961 toluene tolerance protein 0.80 0.32
    16 PP_0958 phospholipid ABC transporter ATP-binding subunit 0.83 0.31
    17 PP_1002 arginine/ornithine antiporter no 0.31
    18 PP_5310 junction-specific ATP-dependent DNA helicase 0.47 0.31
    19 PP_1000 ornithine carbamoyltransferase, catabolic no 0.31
    20 PP_0960 phospholipid ABC transporter binding protein 0.87 0.31

    Or look for negative cofitness