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Cofit
Protein
Homologs
Top cofit genes for PP_1185 from
Pseudomonas putida KT2440
Outer membrane protein H1
SEED: outer membrane protein H1
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1006
putative outer membrane heme receptor
0.65
0.49
2
PP
_1187
sensor protein
0.76
0.39
3
PP
_0351
putative Transmembrane sensor protein
0.45
0.35
4
PP
_0703
putative Transmembrane sensor
no
0.30
5
PP
_3428
conserved protein of unknown function containing tetratricopeptide repeat domain
no
0.23
6
PP
_1666
conserved exported protein of unknown function
no
0.22
7
PP
_1325
putative lipoprotein
0.43
0.22
8
PP
_0003
16S RNA methyltransferase
no
0.21
9
PP
_3957
choline/carnitine/betaine transporter BetTC
no
0.21
10
PP
_0268
outer-membrane porin D
0.36
0.21
11
PP
_4514
putative esterase of the alpha-beta hydrolase superfamily
0.74
0.20
12
PP
_0180
putative cytochrome c family protein
0.24
0.20
13
PP
_4868
Nicotinate phosphoribosyltransferase
no
0.20
14
PP
_0246
two-component system DNA-binding response transcriptional dual regulator
no
0.20
15
PP
_0551
MORN domain protein
no
0.20
16
PP
_5084
penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase
0.43
0.20
17
PP
_0759
conserved exported protein of unknown function
0.49
0.19
18
PP
_1058
conserved protein of unknown function
no
0.19
19
PP
_2884
XRE family transcriptional regulator
no
0.19
20
PP
_1186
two component system DNA-binding transcriptional dual regulator
0.78
0.18
Or look for
negative cofitness