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Cofit
Protein
Homologs
Top cofit genes for PP_1155 from
Pseudomonas putida KT2440
YaiC/YhcK/ArdA family protein
SEED: GGDEF domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4458
putative Opine ABC transporter, periplasmic binding protein
no
0.24
2
PP
_1156
putative inner membrane protein
no
0.21
3
PP
_3676
conserved protein of unknown function
no
0.19
4
PP
_2060
DNA-binding transcriptional dual regulator - SoxR-reversible one-electron oxidation of its [2Fe-2S] cluster, NADPH-dependent
no
0.18
5
PP
_3244
Magnesium transporter, MgtC family
no
0.18
6
PP
_2506
conserved membrane protein of unknown function
no
0.18
7
PP
_0947
conserved membrane protein of unknown function
no
0.18
8
PP
_3703
conserved protein of unknown function
no
0.18
9
PP
_4412
conserved protein of unknown function
no
0.17
10
PP
_0430
conserved protein of unknown function
no
0.17
11
PP
_3692
conserved protein of unknown function
no
0.17
12
PP
_4675
methionine sulfoxide reductase heme-binding subunit
no
0.17
13
PP
_0159
putative CoA-transferase family III
no
0.17
14
PP
_0161
putative transmembrane sensor
no
0.17
15
PP
_4974
NhaP-type Na+/H+ and K+/H+ antiporters
no
0.16
16
PP
_1722
ABC transporter, ATP-binding protein
no
0.16
17
PP
_1173
porin-like protein
no
0.16
18
PP
_0328
formaldehyde dehydrogenase
no
0.16
19
PP
_0570
lipoprotein of unknown function
no
0.16
20
PP
_0787
quinolinate phosphoribosyltransferase (decarboxylating) monomer
0.14
0.16
Or look for
negative cofitness