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  • Top cofit genes for PP_1108 from Pseudomonas putida KT2440

    Acyl-homoserine lactone acylase QuiP
    SEED: Penicillin acylase (EC 3.5.1.11)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5070 ParA family protein no 0.18
    2 PP_1950 conserved protein of unknown function no 0.17
    3 PP_1301 quality control serine endoprotease DegS 0.27 0.16
    4 PP_1427 RNA polymerase sigma E factor 0.33 0.15
    5 PP_1357 conserved protein of unknown function 0.26 0.15
    6 PP_2652 putative Hydratase/decarboxylase no 0.15
    7 PP_4019 DNA topoisomerase III no 0.15
    8 PP_1358 putative heme iron utilization protein no 0.15
    9 PP_0712 polyphosphate kinase 2 no 0.14
    10 PP_2102 Deoxyguanosinetriphosphate triphosphohydrolase-like protein 0.28 0.14
    11 PP_1842 Glutamine amidotransferase, class I no 0.14
    12 PP_5039 conserved protein of unknown function no 0.14
    13 PP_3529 dimethyl-sulfide monooxygenase no 0.14
    14 PP_1789 Hydrolase, haloacid dehalogenase-like family no 0.14
    15 PP_0351 putative Transmembrane sensor protein no 0.13
    16 PP_3154 lipid A 3-O-deacylase no 0.13
    17 PP_0873 putrescine-binding periplasmic protein 0.33 0.13
    18 PP_3786 aminotransferase no 0.13
    19 PP_2445 conserved membrane protein of unknown function 0.14 0.13
    20 PP_2916 riboflavin synthase no 0.13

    Or look for negative cofitness